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"base:title": "0oo - Programming Language for Code of Earth Life"
"og:title": "Programming Language for Code of Earth Life"
"og:description": "So, the code of Life on Earth is quite well understood: we have the [molecular biology dogma](https://en.wikipedia.org/wiki/Central_dogma_of_molecular_biology) ([DNA -&gt; RNA -&gt; Amino Acid](https://upload.wikimedia.org/wikipedia/commons/4/4f/Central_dogma_DNA_RNA_AA.png)), and the [gene products](https://en.wikipedia.org/wiki/Gene_product) are well organized in [biological databases](https://en.wikipedia.org/wiki/List_of_biological_databases). Life has sporadically created a plethora of molecules, via mostly protein-drive metabolic pathways, therefore, **proteins can be thought of as high level &quot;reserved words&quot; of language of life in context of particular metabolism**, and the information about them could be organized a bit like how programming languages are organized (with functions having their docstrings, and protein [active sites](https://en.wikipedia.org/wiki/Active_site) having their type definitions), etc. Ultimately, having some language …"
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"layout:lang": "<n class="oo">O; </n>"
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"item:parent:intents": [{"title": "Biology", "url": "/intent/901/"}, {"title": "Cell and Molecular Biology", "url": "/intent/915/"}, {"title": "Computing", "url": "/intent/902/"}]
"item:title": "Programming Language for Code of Earth Life"
"item:votes": 0
"item:add-vote": "#addnote"
"item:intent": "/intent/10001/?l=oo"
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"item:body": |
    So, the code of Life on Earth is quite well understood: we have the [molecular biology dogma](https://en.wikipedia.org/wiki/Central_dogma_of_molecular_biology) ([DNA -> RNA -> Amino Acid](https://upload.wikimedia.org/wikipedia/commons/4/4f/Central_dogma_DNA_RNA_AA.png)), and the [gene products](https://en.wikipedia.org/wiki/Gene_product) are well organized in [biological databases](https://en.wikipedia.org/wiki/List_of_biological_databases).
    
    Life has sporadically created a plethora of molecules, via mostly protein-drive metabolic pathways, therefore, **proteins can be thought of as high level "reserved words" of language of life in context of particular metabolism**, and the information about them could be organized a bit like how programming languages are organized (with functions having their docstrings, and protein [active sites](https://en.wikipedia.org/wiki/Active_site) having their type definitions), etc.
    
    Ultimately, having some language like that, describing a particular genome may be very short, like just instantiate these set of proteins, and certain metabolic environment.
    
    However, how to realize such programming language is a question. I hadn't see one exist yet.
"item:permalink": "/intent/10001/?l=oo"
"item:source-date": ""
"item:owner": "Mindey"
"item:ownerlink": "/user/147/Mindey"
"item:created": "2021-03-24T21:35:24.977755"
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    <li> <textarea name="text" cols="40" rows="10" id="addnote" class="comment-textarea" required>
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    <li><label for="id_has_questions">Questions&lt;n class=&quot;oo&quot;&gt;:` &lt;/n&gt;</label> <input type="checkbox" name="has_questions" id="id_has_questions"> <span class="helptext">Mark if the comment raises new questions.</span></li>
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    <li><label for="id_has_facts">Facts&lt;n class=&quot;oo&quot;&gt;:` &lt;/n&gt;</label> <input type="checkbox" name="has_facts" id="id_has_facts"> <span class="helptext">Mark if the comment contributes facts for reasoning.</span></li>
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